Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-1254 in CA Breast Richardson Cluster 65 Table contains all genes in the CA Breast Richardson cluster number 65. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1254 79634 SCRN3 secernin 3 [Source:HGNC Symbol;Acc:30382] zzz999 100499483 C9orf174 chromosome 9 open reading frame 174 [Source:HGNC Symbol;Acc:29303] zzz999 145226 RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis) [Source:HGNC Symbol;Acc:19977] zzz999 1536 CYBB cytochrome b-245, beta polypeptide [Source:HGNC Symbol;Acc:2578] zzz999 84141 FAM176A family with sequence similarity 176, member A [Source:HGNC Symbol;Acc:25816] zzz999 80055 PGAP1 post-GPI attachment to proteins 1 [Source:HGNC Symbol;Acc:25712] zzz999 79867 TCTN2 tectonic family member 2 [Source:HGNC Symbol;Acc:25774] zzz999 55200 PLEKHG6 pleckstrin homology domain containing, family G (with RhoGef domain) member 6 [Source:HGNC Symbol;Acc:25562] T 7185 TRAF1 TNF receptor-associated factor 1 [Source:HGNC Symbol;Acc:12031] T 28514 DLL1 delta-like 1 (Drosophila) [Source:HGNC Symbol;Acc:2908] zzz999 5510 PPP1R7 protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:HGNC Symbol;Acc:9295] zzz999 64146 COG8 component of oligomeric golgi complex 8 [Source:HGNC Symbol;Acc:18623] zzz999 53345 TM6SF2 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:11861] zzz999 374946 C1orf187 chromosome 1 open reading frame 187 [Source:HGNC Symbol;Acc:25054] T 165530 CLEC4F C-type lectin domain family 4, member F [Source:HGNC Symbol;Acc:25357] zzz999 130367 SGPP2 sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:19953] zzz999 25841 ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 [Source:HGNC Symbol;Acc:23842] T 5013 OTX1 orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:8521] zzz999 8643 PTCH2 patched 2 [Source:HGNC Symbol;Acc:9586] zzz999 286223 C9orf47 chromosome 9 open reading frame 47 [Source:HGNC Symbol;Acc:23669] T 56929 FEM1C fem-1 homolog c (C. elegans) [Source:HGNC Symbol;Acc:16933] zzz999 25999 CLIP3 CAP-GLY domain containing linker protein 3 [Source:HGNC Symbol;Acc:24314] T 7222 TRPC3 transient receptor potential cation channel, subfamily C, member 3 [Source:HGNC Symbol;Acc:12335] zzz999 9355 LHX2 LIM homeobox 2 [Source:HGNC Symbol;Acc:6594] zzz999 128077 LIX1L Lix1 homolog (mouse)-like [Source:HGNC Symbol;Acc:28715] zzz999 130 ADH6 alcohol dehydrogenase 6 (class V) [Source:HGNC Symbol;Acc:255] zzz999 23294 ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A [Source:HGNC Symbol;Acc:20961] T 494470 RNF165 ring finger protein 165 [Source:HGNC Symbol;Acc:31696] zzz999 5927 KDM5A lysine (K)-specific demethylase 5A [Source:HGNC Symbol;Acc:9886] P T 6511 SLC1A6 solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6 [Source:HGNC Symbol;Acc:10944] zzz999 55153 SDAD1 SDA1 domain containing 1 [Source:HGNC Symbol;Acc:25537] zzz999 63970 TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 [Source:HGNC Symbol;Acc:29984] T 152816 C4orf26 chromosome 4 open reading frame 26 [Source:HGNC Symbol;Acc:26300] zzz999 54953 C1orf27 chromosome 1 open reading frame 27 [Source:HGNC Symbol;Acc:24299] T 11211 FZD10 frizzled homolog 10 (Drosophila) [Source:HGNC Symbol;Acc:4039] zzz999 80896 NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase) [Source:HGNC Symbol;Acc:16781] zzz999 147372 CCBE1 collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:29426] T 2020 EN2 engrailed homeobox 2 [Source:HGNC Symbol;Acc:3343] zzz999 79668 PARP8 poly (ADP-ribose) polymerase family, member 8 [Source:HGNC Symbol;Acc:26124] zzz999 26190 FBXW2 F-box and WD repeat domain containing 2 [Source:HGNC Symbol;Acc:13608] zzz999 4676 NAP1L4 nucleosome assembly protein 1-like 4 [Source:HGNC Symbol;Acc:7640] T 10913 EDAR ectodysplasin A receptor [Source:HGNC Symbol;Acc:2895] T 7480 WNT10B wingless-type MMTV integration site family, member 10B [Source:HGNC Symbol;Acc:12775] T 29930 PCDHB1 protocadherin beta 1 [Source:HGNC Symbol;Acc:8680] zzz999 10500 SEMA6C sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C [Source:HGNC Symbol;Acc:10740] zzz999 57620 STIM2 stromal interaction molecule 2 [Source:HGNC Symbol;Acc:19205] P T 81609 SNX27 sorting nexin family member 27 [Source:HGNC Symbol;Acc:20073] T 133121 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 [Source:HGNC Symbol;Acc:23409] T 55110 MAGOHB mago-nashi homolog B (Drosophila) [Source:HGNC Symbol;Acc:25504] zzz999 2248 FGF3 fibroblast growth factor 3 [Source:HGNC Symbol;Acc:3681] zzz999 164592 CCDC116 coiled-coil domain containing 116 [Source:HGNC Symbol;Acc:26688] zzz999 4014 LOR loricrin [Source:HGNC Symbol;Acc:6663] zzz999 116519 APOA5 apolipoprotein A-V [Source:HGNC Symbol;Acc:17288] zzz999 3680 ITGA9 integrin, alpha 9 [Source:HGNC Symbol;Acc:6145] zzz999 23637 RABGAP1 RAB GTPase activating protein 1 [Source:HGNC Symbol;Acc:17155] zzz999 152002 C3orf21 chromosome 3 open reading frame 21 [Source:HGNC Symbol;Acc:26639] zzz999 222642 TSPO2 translocator protein 2 [Source:HGNC Symbol;Acc:21256] zzz999 146857 SLFN13 schlafen family member 13 [Source:HGNC Symbol;Acc:26481] T 79033 ERI3 ERI1 exoribonuclease family member 3 [Source:HGNC Symbol;Acc:17276] T 7298 TYMS thymidylate synthetase [Source:HGNC Symbol;Acc:12441] zzz999 9140 ATG12 ATG12 autophagy related 12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:588] T 54796 BNC2 basonuclin 2 [Source:HGNC Symbol;Acc:30988] zzz999 147945 NLRP4 NLR family, pyrin domain containing 4 [Source:HGNC Symbol;Acc:22943] zzz999 90861 HN1L hematological and neurological expressed 1-like [Source:HGNC Symbol;Acc:14137] zzz999 7091 TLE4 transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila) [Source:HGNC Symbol;Acc:11840] zzz999 970 CD70 CD70 molecule [Source:HGNC Symbol;Acc:11937] zzz999 63948 DMRTB1 DMRT-like family B with proline-rich C-terminal, 1 [Source:HGNC Symbol;Acc:13913] zzz999 121268 RHEBL1 Ras homolog enriched in brain like 1 [Source:HGNC Symbol;Acc:21166] zzz999 154288 C6orf221 chromosome 6 open reading frame 221 [Source:HGNC Symbol;Acc:33699] zzz999 3239 HOXD13 homeobox D13 [Source:HGNC Symbol;Acc:5136] P T 126668 TDRD10 tudor domain containing 10 [Source:HGNC Symbol;Acc:25316] zzz999 91607 SLFN11 schlafen family member 11 [Source:HGNC Symbol;Acc:26633] zzz999 83714 NRIP2 nuclear receptor interacting protein 2 [Source:HGNC Symbol;Acc:23078] zzz999 25849 PARM1 prostate androgen-regulated mucin-like protein 1 [Source:HGNC Symbol;Acc:24536] T 3559 IL2RA interleukin 2 receptor, alpha [Source:HGNC Symbol;Acc:6008] T 23452 ANGPTL2 angiopoietin-like 2 [Source:HGNC Symbol;Acc:490] T 6469 SHH sonic hedgehog [Source:HGNC Symbol;Acc:10848] zzz999 400720 ZNF772 zinc finger protein 772 [Source:HGNC Symbol;Acc:33106] T 9242 MSC musculin [Source:HGNC Symbol;Acc:7321] zzz999 57097 PARP11 poly (ADP-ribose) polymerase family, member 11 [Source:HGNC Symbol;Acc:1186] zzz999 29785 CYP2S1 cytochrome P450, family 2, subfamily S, polypeptide 1 [Source:HGNC Symbol;Acc:15654] zzz999 10941 UGT2A1 UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus [Source:HGNC Symbol;Acc:12542] zzz999 11036 GTF2A1L general transcription factor IIA, 1-like [Source:HGNC Symbol;Acc:30727] zzz999 259215 LY6G6F lymphocyte antigen 6 complex, locus G6F [Source:HGNC Symbol;Acc:13933] zzz999 7161 TP73 tumor protein p73 [Source:HGNC Symbol;Acc:12003] T 8626 TP63 tumor protein p63 [Source:HGNC Symbol;Acc:15979] zzz999 50515 CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 [Source:HGNC Symbol;Acc:17422] zzz999 9394 HS6ST1 heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:5201] T 145497 C14orf166B chromosome 14 open reading frame 166B [Source:HGNC Symbol;Acc:23346] zzz999 127534 GJB4 gap junction protein, beta 4, 30.3kDa [Source:HGNC Symbol;Acc:4286] zzz999 126129 CPT1C carnitine palmitoyltransferase 1C [Source:HGNC Symbol;Acc:18540] T 2018 EMX2 empty spiracles homeobox 2 [Source:HGNC Symbol;Acc:3341] T 6900 CNTN2 contactin 2 (axonal) [Source:HGNC Symbol;Acc:2172] T 7039 TGFA transforming growth factor, alpha [Source:HGNC Symbol;Acc:11765] T 11228 RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 [Source:HGNC Symbol;Acc:13232] zzz999 5090 PBX3 pre-B-cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:8634] zzz999 4625 MYH7 myosin, heavy chain 7, cardiac muscle, beta [Source:HGNC Symbol;Acc:7577] zzz999 201798 TIGD4 tigger transposable element derived 4 [Source:HGNC Symbol;Acc:18335] zzz999 57556 SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A [Source:HGNC Symbol;Acc:10738] zzz999 285555 C4orf37 chromosome 4 open reading frame 37 [Source:HGNC Symbol;Acc:28712] zzz999 9965 FGF19 fibroblast growth factor 19 [Source:HGNC Symbol;Acc:3675] T 1591 CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2602] zzz999 171024 SYNPO2 synaptopodin 2 [Source:HGNC Symbol;Acc:17732] zzz999 8973 CHRNA6 cholinergic receptor, nicotinic, alpha 6 [Source:HGNC Symbol;Acc:15963] zzz999 8906 AP1G2 adaptor-related protein complex 1, gamma 2 subunit [Source:HGNC Symbol;Acc:556] zzz999 8745 ADAM23 ADAM metallopeptidase domain 23 [Source:HGNC Symbol;Acc:202] zzz999 140832 WFDC10A WAP four-disulfide core domain 10A [Source:HGNC Symbol;Acc:16139] zzz999 3236 HOXD10 homeobox D10 [Source:HGNC Symbol;Acc:5133] zzz999 5972 REN renin [Source:HGNC Symbol;Acc:9958] T 2590 GALNT2 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2) [Source:HGNC Symbol;Acc:4124] T 169044 COL22A1 collagen, type XXII, alpha 1 [Source:HGNC Symbol;Acc:22989] zzz999 222545 GPRC6A G protein-coupled receptor, family C, group 6, member A [Source:HGNC Symbol;Acc:18510] zzz999 27338 UBE2S ubiquitin-conjugating enzyme E2S [Source:HGNC Symbol;Acc:17895] zzz999 140876 FAM65C family with sequence similarity 65, member C [Source:HGNC Symbol;Acc:16168] T 25791 NGEF neuronal guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:7807] T 5378 PMS1 PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:9121] zzz999 117 ADCYAP1R1 adenylate cyclase activating polypeptide 1 (pituitary) receptor type I [Source:HGNC Symbol;Acc:242] zzz999 57105 CYSLTR2 cysteinyl leukotriene receptor 2 [Source:HGNC Symbol;Acc:18274] T 7693 ZNF134 zinc finger protein 134 [Source:HGNC Symbol;Acc:12918] zzz999 3237 HOXD11 homeobox D11 [Source:HGNC Symbol;Acc:5134] zzz999 57542 KLHDC5 kelch domain containing 5 [Source:HGNC Symbol;Acc:29252] zzz999 57829 ZP4 zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:15770] zzz999 8924 HERC2 hect domain and RLD 2 [Source:HGNC Symbol;Acc:4868] T 116135 LRRC3B leucine rich repeat containing 3B [Source:HGNC Symbol;Acc:28105] zzz999 84695 LOXL3 lysyl oxidase-like 3 [Source:HGNC Symbol;Acc:13869] zzz999 149708 WFDC5 WAP four-disulfide core domain 5 [Source:HGNC Symbol;Acc:20477] zzz999 84365 MKI67IP MKI67 (FHA domain) interacting nucleolar phosphoprotein [Source:HGNC Symbol;Acc:17838] zzz999 80727 TTYH3 tweety homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:22222] T 201158 FAM18B2 family with sequence similarity 18, member B2 [Source:HGNC Symbol;Acc:30453] zzz999 5116 PCNT pericentrin [Source:HGNC Symbol;Acc:16068] zzz999 9468 PCYT1B phosphate cytidylyltransferase 1, choline, beta [Source:HGNC Symbol;Acc:8755] T 56731 SLC2A4RG SLC2A4 regulator [Source:HGNC Symbol;Acc:15930] T 3293 HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3 [Source:HGNC Symbol;Acc:5212] zzz999 1583 CYP11A1 cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:HGNC Symbol;Acc:2590] zzz999 27121 DKK4 dickkopf homolog 4 (Xenopus laevis) [Source:HGNC Symbol;Acc:2894] zzz999 81629 TSSK3 testis-specific serine kinase 3 [Source:HGNC Symbol;Acc:15473] zzz999 8359 HIST2H4B histone cluster 2, H4b [Source:HGNC Symbol;Acc:29607] zzz999 8403 SOX14 SRY (sex determining region Y)-box 14 [Source:HGNC Symbol;Acc:11193] zzz999 7135 TNNI1 troponin I type 1 (skeletal, slow) [Source:HGNC Symbol;Acc:11945] T 51363 CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:HGNC Symbol;Acc:18137] T 152756 C4orf39 chromosome 4 open reading frame 39 [Source:HGNC Symbol;Acc:26466] T 55297 CCDC91 coiled-coil domain containing 91 [Source:HGNC Symbol;Acc:24855] zzz999 50489 CD207 CD207 molecule, langerin [Source:HGNC Symbol;Acc:17935] zzz999

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